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Принципы структурной организации нуклеиновых кислот

Автор В.Зенгер

Shakked Z., Rabinovich D., Cruse W. В. Т., Egert E., Kennard O., Sola G., Salisbury S.A., Viswamitra M.A. Crystalline A-DNA: The X-ray analysis of the fragment d(G—G—T—A—T—А—С—C\ Proc. Roy. Soc. London Ser. B, 231, 47SM87 (1981).

894a. Shakked Z, Kennard O. The A-form of DNA. In: A. McPherson and F. Jurnak,

eds. Structural Biology, John Wiley and Sons, New York, 1983. - 895. Zimmerman S. В., Pheiffer В. H. A direct demonstration that the ethanol-induced

transition of DNA is between the A and В forms: an X-ray diffraction study, J.

Mol. Biol, 135, 1023-1027 (1979). I 896. Holbrook S.R., Sussman J. L, Kim S.-H. Absence of correlation between

base-pair sequence and RNA-conformation, Science, 212, 1275-1277 (1981). 897. Schellman J. A. Flexibility of DNA, Biopolymers, 13, 217-226 1974. I 898. Millar D. P., Robbins R. J., Zewail A. H. Direct observation of the torsional

dynamics of DNA and RNA by picosecond spectroscopy, Proc. Nat. Acad. Sci.

USA, 77, 5593-5597 (1980). ' 899. Dickerson R. E., Drew H. R. Structure of a B-DNA dodecamer. II. Influence of

base sequence on helix structure, J. Mol. Biol, 149, 761 786 (1981). K99a. Drew H. R, Wing R. M., Takano Т., Broka C, Tanaka S, Itakura K.,

Dickerson R.E. Structure of B-DNA dodecamer: conformation and dynamics,

Proc. Nat. Acad. Sci. (USA), 78, 2179-2183 (1981). B99b. Kabsch W., Sander C, Trifonov E. N. The ten helical twist angles of B-DNA,

Nucl. Acid Res, 10, 1097-1104 (1982). I 900. Klug A., Jack A., Viswamitra M. A., Kennard O, Shakked Z, Steitz T. A.

A hypothesis on a specific sequence-dependent conformation of DNA and its

relation to the binding of the fac-repressor protein, J. Mol. Biol, 131, 669-680

(1979).

544

Литература

900а. Viswamitra М. A., Shakked Z.. Jones Р. С. Sheldrick G. M.. Salisbury S. A.. Kennard O. Structure of the deoxytetranucleotide d-pApTpApT and a sequence-dependent model for polyfdA dT), Biopolymers, 21, 513-533 (1982).

901. Hosur R.V.. Govil G.. Hosur M.V.. Viswamitra M. A. Sequence effect in structures of the dinucleotides d-pApT and d-pTpA, J. Mol. Struct, 72, 261-267 (1981).

902. Wilson H. R.. Al-Mukhtar J. Structure of fhymidylyl-3',5'-deoxyadenosine. Nature, 263, 171 172 (1976).

902a. Radwan M. M.. Wilson H. R. Fiber and molecular structure of thymidylyl-3',5'-deoxyadenosine, Int. J. Biol. Macromol, 4, 145-149 (1982).

903. Shindo H.. Zimmerman S. B. Sequence-dependent variations in the backbone geometry of a synthetic DNA fibre, Nature, 283, 690-691 (1980).

904. Shindo H.. Simpson R. Т.. Cohen J. S. An alternating conformation characterizes phosphodiester backbone of poly a(A-T) in solution, J. Biol. Chem, 254, 8125-8128 (1979).

905. Patel D. J.. Canuel L. L.. Pohl F. M. "Alternating B-DNA" conformation for the oligo (dG-dC) duplex in high-salt solution, Proc. Nat. Acad. Sci. USA, 76, 2508-2511 (1979).

906. Schefler I.E.. ElsonE.L.. Baldwin R.L. Helix formation by d(A-T) oligomers. I. Hairpin and straight chain helices, J. Mol. Biol, 36, 291-304 (1968).

907. Lutter L. C. Deoxyribonuclease I produces staggered cuts in the DNA of chromatin, J. Mol. Biol, 117, 53-69 (1977).

908. RiggsA.D.. LinS.-Y. Wells R.D. lac repressor binding to synthetic DNAs of defined nucleotide sequence, Proc. Nat. Acad. Sci. USA, 69, 761-764 (1972).

909. Peck L. J., Wang J. C. Sequence dependence of the helical repeat of DNA in solution, Nature, 292, 375-378 (1981).

910. Rhodes D.. Klug A. Sequence-dependent helical periodicity of DNA, Nature, 292, 378-380 (1981).

910a. Strauss F.. Gaillard C, Prunell A. Helical periodicity of DNA, poly (dA)-poly (dT) and poly (dA-dT) poly (dA-dT) in solution, Eur. J. Biochem, 118. 215-222 (1981).

911. Brahms J., Pilet J.. Lan T.-T.P.. Hill L.R. Direct evidence of the C-like form of sodium deoxyribonucleate, Proc. Nat. Acad Sci. USA, 70, 3352-3355 (1973).

911a. Rhodes N.J., Mahendrasingam A.. Pigram W.J.. Fuller W„ Brahms J., Vergne J.. Warren R. A. J. The С conformation in a low salt form of sodium DNA. Nature, 296, 267-269 (1982).

912. Zimmerman S. В.. Pheiffer B.H. A RNA DNA hybrid that can adopt two conformations: An X-ray diffraction study of poly (A)-poly (dT) in concentrated solution or in fibers, Proc. Nat. Acad. Sci USA, 78, 78 82 (1981).

913. Arnott S, Bond P.J. Structures for poly (U) • poly (A) • poly (U) triple stranded helices, Nature New Biol, 244, 99-101 (1973).

913a. Wang A.H.-J.. Fujii S, BoomJ.H. van. Morel G.A. van. Boeckel S.A.A. van. Rich A. Molecular structure of r (GCG) d (TATACGC): A DNA-RNA hybrid helix joined to double helical DNA, Nature, 299, 601-604 (1982)

914. Pohl F. M.. Jovin Т. M. Salt-induced co-operative conformational change of a synthetic DNA: Equilibrium and kinetic studies with poly d(G-C), J. Mol. Biol, 67, 375 396 (1972).

915. Pohl F.M. Polymorphism of a synthetic DNA in solution, Nature, 260, 365-366 (1976).

916. Davies DR., Zimmerman S.B. A new twist for DNA? Nature, 283, 11-12 (1980).

917. Wang A.H.-J., Quigley G.J.. Kolpak F.J., Morel G. van der. BoomJ.H. van.

Литература

545

Rich A. Left-handed double helical DNA. Variations in the backbone conformation, Science, 211, 171 176 (1980).

1918. Drew H.R., Dickerson R.E.. Itakura K. A salt-induced conformational change in crystals of the synthetic DNA tetramer d(CpGpCpG), J. Mol. Biol., 125. 535-543 (1978).

1919. Crawford J. L.. Kolpak F.J.. Wang A.H.-J. QuigleyG.J.. BoomJ.H. van. Morel G. van der. Rich A. The tetramer d(CpGpCpG) crystallizes as a left-handed double helix. Proc. Nat. Acad. Sci USA, 77, 4016^1020 (1980).

[•920. Drew H.R.. Dickerson R.E. Conformation and dynamics in a Z'-DNA tetramer,

J. Mol. Biol, 152, 723-736 (1981). "921. Mitra С. K.. Sarma M. H . Sarma R. H. Left-handed deoxyribonucleic acid double helix in solution, Biochemistry, 20, 2036 2041 (1981).

>*922. Behe M.. Zimmerman S. В.. Felsenfeld G. Changes in the helical repeat of poly(dG-rn5dC)poly(dG-m5dC) and poly (dG-dC)-poly (dG-dC) associated with the B-Z transition, Nature, 293, 233-235 (1981).

I 923. Neumann J. M.. Guschlbauer W.. Tran-Dinh S. Conformation and flexibility of GpC and CpG in neutral aqueous solutions using 'H nuclear-magnetic-resonance and spin-lattice-relaxation time measurements, Eur. J. Biochem, 100, 141 148 (1979).

¦924. Saenger W.. Landmann H.. Lezius A. G. X-Ray diffraction studies on fibers of poly d(A-s4T)poly d(A-s4T), Jerus. Sympos. Quant. Chem. Biochem, 5, 457-467 (1973).

K4a. Sande J. H. van de. Jovin Т. M. Z*DNA, the left-handed helical form of poly[d(G-C)] in MgCl2-ethanol, is biologically active, EMBO J, 1, 115 120 (1982).

925. Santella R. M.. Grunberger D.. Weinstein I. В.. Rich A. Induction of the Z conformation of poly(dG-dC)poly(dG dC) by binding of N-2-acetylaminofluorene to guanine residues, Proc. Nat. Acad. Sci. USA, 78, 1451-1455 (1981).

|>25a. Nickol J.. Behe M.. Felsenfeld G. Effect of the B-Z transition in poly(dG —

m5dC)-poly(dG-m5dC) on nucleosome formation, Proc. Nat. Acad. Sci.

(USA), 79, 1771-1775 (1982). !P26. Nordheim A.. Pardue M. L., Lafer E. M.. Moller A.. Stollar D.. Rich A.

Antibodies to left-handed Z-DNA bind to interband regions of Drosophihi

polytene chromosomes, Nature, 294, 417-422 (1981). P27. Behe M.. Felsenfeld G. Effects on methylation on a synthetic polynucleotide:

The B-Z transition in poly(dG m5C)-poly(dG-m5C), Proc. Nat. Acad. Sci.

USA, 78, 1619-1623 (1981). 928. Razin A.. Riggs A. D. DNA methylation and gene function, Science, 210,

604-610 (1980).

»29. Klysik J.. Stirdivant S. M.. Larson J. ?., Hart P. A.. Wells R. D.. Left-handed DNA in restriction fragments and a recombinant plasmid, Nature, 290, 672-677

(1981) .

l29a. Singleton С. K.. Klysik K.. Stirdivant S. M.. Wells R. D. Lefthanded Z-DNA is induced by supercoiling in physiological ionic conditions, Nature, 299, 312 316

(1982) .

30. Prescott В.. Gamache R, Livramento J.. Thomas G.J.. Jr. Raman studies of nucleic acids. XII. Conformations of oligonucleotides and deuterated polynucleotides, Biopolymers, 13, 1821-1845 (1974). 31. Leng M.. Felsenfeld G. A study of polyadenylic acid at neutral pH, J. Mol. Biol, 15, 455^166 (1966)

546 Литература

932 Eisenberg Я, Felsenfeld G. Studies on the temperature-dependent conformation and phase separation of polyriboadenylic acid solutions at neutral pH, J. Mol. Biol, 30, 17-37 (1967).

933. Achter E. K., Felsenfeld G. The conformation of single-strand polynucleotides in solution: Sedimentation studies of apurinic acid, Biopolymers, 10, 1625-1634 (1971).

934. Edmonds M., Winters M. A. Polyadenylate polymerases, Prog. Nucl. Acid Res. Mol. Biol, 17, 149-179 (1976).

935. Ahlquist P., Kaesberg P. Determination of the length distribution of poly (A) at the З'-terminus of the virion RNAs of EMC virus, poliovirus, rhinovirus, RAV-61 and CPMV and of mouse globin mRNA, Nucl. Acids Res, 7, 1195-1204 (1978).

936. Akinrimisi E. O, Sander C, Ts'o P. O. P. Properties of helical polycytidylic acid, Biochemistry, 2, 340-344 (1963).

937. Fasman G.D., Lindblow C, Grossman L. The helical conformation of polycytidylic acid: Studies on the forces involved. Biochemistry, 3, 1015-1021 (1964).

938. Adler A., Grossman L, Fasman G. D. Single-stranded oligomers and polymers of cytidylic and 2'-deoxycytidylic acids: comparative optical rotatory studies, Proc. Nat. Acad. Sci. USA, 57, 423-430 (1967).

939. Guschlbauer W. Protonated polynucleotide structures. I. The therminal dena-turation of polycytidylic acid in solution, Proc. Nat. Acad. Sci. USA, 57, 1441-1448 (1967)

940. Mahler H. R., Green G. Comparative study of polyribonucleotides in aqueous and glycol solutions, Biochemistry, 9, 368-387 (1970).

941. Gulik A., Inoue Я, Luzzati V. Conformation of single-stranded polynucleotides: Small-angle X-ray scattering and spectroscopic study of polyribocytidylic acid in water and in water-alcohol solutions, J. Mol. Biol, 53, 221-238 (1970).

942. Yang J. T, Samejima T. Optical rotatory dispersion and circular dichroism of nucleic acids, Prog. Nucl. Acid Res. Mol. Biol, 9, 223-300 (1976).

943. Borah В., WoodJ.L. The cytidinium-cytidine complex: Infrared and Raman spectroscopic studies, J. Mol. Struct, 30, 13-30 (1976).

944. Marsh R. E., Bierstedt R, Eichhom E. L. The crystal structure of cytosine-5-acetic acid, Acta Crystallogr, 15, 310-316 (1962).

945. Kistenmacher T. J., Rossi M., Marzilli L. G. A model for the interrelationship between asymmetric interbase hydrogen bonding and base-base stacking in hemiprotonated polyribocytidylic acid: Crystal structure of 1-methylcytosine hemihydroiodide hemihydrate, Biopolymers, 17, 2581-2585 (1978).

946. Alderfer J, Tazawa I., Tazawa S, Ts'o P. O. P. Comparative studies on polydeoxyr'ibocytidylate (dC), polyribocytidylate (rC) and poly-2'-0-methylribocytidylate (mC) and polydeoxyriboinosinate (dl), polyriboinosinate (rl) and poly-2'-0-methylriboinosinate (ml), Biophys. J, 15, 29a (1975).

947. Leslie A. G. W., Arnott S. Structure of single-stranded polyribonucleotide poly(2'-0-methylcytidylic acid), J. Mol. Biol, 119, 399^114 (1978).

948. Stellman S. D., Broyde S. В., Wartell M. Influence of ribose-2'-0-methylation on GpC conformation by classical potential energy calculations, 15, 1951-1964 (1976).

949. Stellman S. D., Hingerty В., Langridge R. Conformation of a rare nucleoside in the anticodon loop of tRNAs: Potential energy calculations for 2'-0-methyl cytidine, Biopolymers, 14, 2049-2060 (1975).

950. Hingerty В., Bond P. J., Langridge R, Rottman F. Conformation of 2'-0-methyl

Литература

547

cytidine, a modified furanose component of ribonucleic acids, Boichem. Biophys. Res. Commun, 61, 875-881 (1974). *950a. Broido M.S., Kearns D.R. NMR evidence for a left-handed helical structure of poly (ribocytidylic acid) in neutral solution, J. Amer. Chem. Soc, 104, 5207-5216 (1982).

.951. Scovell W.M. Structural and conformational studies of polyribonucleic acid in

neutral and acid solution, Biopolymers, 17, 969 984 (1978). ' 952 Brahms J., Michelson A. M., Holde К. E. Van. Adenylate oligomers in single- and double-stranded conformation, J. Mol. Biol, 15, 467-488.

953. Wtz J., Luzzati V. La structure des acides polyadenylique et polyuridylique en solution: etude par diffusion centrale des rayons X, J. Mol. Biol, 11, 620-630 (1965).

954. Holcomb D. N.. Tinoco I. Jr. Conformation of polyriboadenylic acid: pH and temperature dependence, Biopolymers, 3, 121-133 (1965).

. 955. Thiyagarajan P., Ponnuswamy P. K. Conformational characteristics of the RNA subunit ApA from energy minimization studies, Biopolymers, 17, 2143-2158 (1978).

956. Olson W.K. The spatial configuration of ordered polynucleotide chins. II. The

poly(rA) helix, Nucl. Acids Res, 2, 2055-2068 (1975). I 957. Saenger W., Riecke J., Suck D. A structural model for the polyadenylic acid

single helix, J. Mol. Biol, 93, 529-534 (1975). 958. Olsthoorn C. S. M., Bostelaar L. J., Boom J. H. van, Altona C. Conformational

characteristics of the trinucleoside diphosphate dApdApdA and its constituents

from nuclear magnetic resonance and circular dichroism studies, Eur. J.

Biochem, 112, 95-100 (1980). [.959. KahanaZ.E., Erlanger B.F. Immunochemical study of the structure of

poly(adenylic acid), Biochemistry, 19, 320-324 (1980).

960. Finder J. C, Staynov D. Z, Gratzer W. B. Properties of RNA in formamide, Biochemistry, 13, 5367-5373 (1974).

961. Strauss J. H. Jr., Kelly R. В., Sinsheimer R. L. Denaturation of DNA with dimethyl sulfoxide, Biopolymers, 6, 793-807 (1968).

1962 Morgan R.S., Byrne R. "Alcaline" polyadenylic acid, J. Mol. Biol, 1, 188-189 (1959).

963. Zimmerman S. В., Davies D. R, Navia M. A. An ordered single-stranded structure for polyadenylic acid in denaturating solvents. An X-ray fiber diffraction and model building study, J. Mol. Biol, 116, 317-330 (1977).

964. Kim S.-H.. Sussman J. L. 7t-Turn is a conformational pattern in RNA loops and bends, Nature, 260, 645-646 (1976).

>ii)65. Fresco J. R. Polynucleotides. II. The X-ray diffraction patterns of solutions of the randomly coiled and helical forms of polyriboadenylic acid, J. Mol. Biol, 1, 106-110 (1959).

966. Zimmerman S. В., Coleman N. F. An ordered precipitate of polyadenylic acid formed by freezing at acids pH: Comparison of X-ray diffraction and other properties of the precipitate with those of fibers or direct acid-precipitates, Biopolymers, 11, 1943-1960 (1972).

Щ 967. Finch J. Т., Klug A. Two double helical forms of polyriboadenylic acid and the pH-dependent transition between them, J. Mol. Biol, 46, 597-598 (1969).

|P67a Lerner D. В., Kearns D. R. Proton and phosphorus NMR investigation of the conformational states of acid polyadenylic double helix, Biopolymers, 20, 803-816 (1981).

L 968. Suck D., Manor P.C., Saenger W. The structure of a trinucleoside diphosphate:

I 35*

548

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